Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | DWX04_14900 | Not Available | Positive | 3499133 - 3500236 | 40801.9 |
| ketopantoate reductase family protein | DWX04_14905 | Not Available | Positive | 3500356 - 3501267 | 33017.2 |
| prolipoprotein diacylglyceryl transferase | DWX04_14910 | Not Available | Positive | 3501264 - 3502085 | 31477.1 |
| chloramphenicol acetyltransferase | DWX04_14915 | Not Available | Positive | 3502086 - 3502742 | 25277.0 |
| ytxh domain-containing protein | DWX04_14920 | Not Available | Negative | 3503117 - 3503365 | 9308.13 |
| hypothetical protein | DWX04_14925 | Not Available | Negative | 3503571 - 3503894 | 11727.4 |
| xanthine phosphoribosyltransferase | DWX04_14930 | Not Available | Positive | 3504251 - 3504817 | 20888.7 |
| purine permease | DWX04_14935 | Not Available | Positive | 3504822 - 3506153 | 46702.4 |
| phosphotransferase | DWX04_14940 | Not Available | Positive | 3506256 - 3507686 | 55498.1 |
| nucleotidyltransferase family protein | DWX04_14945 | Not Available | Positive | 3507683 - 3508528 | 32260.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

