Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine phosphoribosyltransferase | DWX04_14850 | Not Available | Positive | 3489605 - 3490129 | 19189.4 |
| hypothetical protein | DWX04_14855 | Not Available | Negative | 3490148 - 3490357 | 7855.58 |
| excinuclease abc subunit uvrc | DWX04_14860 | Not Available | Positive | 3490360 - 3492180 | 69878.8 |
| d-tyrosyl-trna(tyr) deacylase | DWX04_14865 | Not Available | Positive | 3492338 - 3492790 | 16476.0 |
| pyrophosphatase | DWX04_14870 | Not Available | Positive | 3492790 - 3493110 | 12338.7 |
| deoxyribose-phosphate aldolase | DWX04_14875 | Not Available | Positive | 3493117 - 3494064 | 34798.2 |
| polyprenyl synthetase family protein | DWX04_14880 | Not Available | Negative | 3494255 - 3495229 | 36285.5 |
| dna polymerase i | DWX04_14885 | Not Available | Positive | 3495321 - 3498236 | 109289.0 |
| hypothetical protein | DWX04_14890 | Not Available | Positive | 3498307 - 3498519 | 8002.83 |
| duf3836 domain-containing protein | DWX04_14895 | Not Available | Positive | 3498546 - 3498932 | 15047.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

