Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_14795 | Not Available | Negative | 3474829 - 3477852 | 109980.0 |
| arac family transcriptional regulator | DWX04_14800 | Not Available | Negative | 3477897 - 3478391 | 19177.3 |
| site-specific integrase | DWX04_14805 | Not Available | Negative | 3479203 - 3480141 | 36160.6 |
| murein l,d-transpeptidase | DWX04_14810 | Not Available | Positive | 3480349 - 3481368 | 38928.9 |
| hypothetical protein | DWX04_14815 | Not Available | Positive | 3481371 - 3482168 | 29189.2 |
| hypothetical protein | DWX04_14825 | Not Available | Positive | 3483348 - 3484580 | 44191.2 |
| endoribonuclease ybey | DWX04_14830 | Not Available | Positive | 3484625 - 3485041 | 15838.9 |
| hypothetical protein | DWX04_14835 | Not Available | Positive | 3485268 - 3485801 | 20261.5 |
| flotillin family protein | DWX04_14840 | Not Available | Positive | 3485827 - 3487527 | 62444.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DWX04_14845 | Not Available | Positive | 3487674 - 3489545 | 69615.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

