Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DWX04_14745 | Not Available | Negative | 3462143 - 3462829 | 25487.5 |
| phosphatase pap2 family protein | DWX04_14750 | Not Available | Positive | 3463020 - 3463631 | 22003.9 |
| s41 family peptidase | DWX04_14755 | Not Available | Negative | 3463735 - 3465336 | 60811.7 |
| phosphopantetheine adenylyltransferase | DWX04_14760 | Not Available | Negative | 3465339 - 3465794 | 17350.0 |
| type iia dna topoisomerase subunit b | DWX04_14765 | Not Available | Negative | 3465812 - 3467689 | 71007.7 |
| n-acetyltransferase | DWX04_14770 | Not Available | Negative | 3467720 - 3468856 | 43786.0 |
| sodium:calcium antiporter | DWX04_14775 | Not Available | Negative | 3468931 - 3469893 | 33588.9 |
| acid phosphatase | DWX04_14780 | Not Available | Negative | 3469957 - 3470928 | 37239.9 |
| tonb-dependent receptor | DWX04_14785 | Not Available | Negative | 3470939 - 3473707 | 104184.0 |
| hypothetical protein | DWX04_14790 | Not Available | Negative | 3474266 - 3474745 | 18237.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

