Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_02876 | DWX04_14685 | Not Available | Negative | 3449521 - 3450438 | Not Available |
| acyl-coa thioesterase | DWX04_14690 | Not Available | Positive | 3450497 - 3450904 | 15657.8 |
| dna-protecting protein dpra | DWX04_14695 | Not Available | Positive | 3450901 - 3452016 | 40984.5 |
| glycoside hydrolase family 29 | DWX04_14700 | Not Available | Negative | 3452097 - 3453980 | 70601.9 |
| duf3575 domain-containing protein | DWX04_14710 | Not Available | Positive | 3454575 - 3455942 | 52259.5 |
| duf5119 domain-containing protein | DWX04_14715 | Not Available | Positive | 3455909 - 3456904 | 36240.8 |
| fimbrillin family protein | DWX04_14720 | Not Available | Positive | 3456953 - 3457942 | 35806.3 |
| arac family transcriptional regulator | DWX04_14730 | Not Available | Positive | 3458449 - 3459309 | 33239.9 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DWX04_14735 | Not Available | Negative | 3459374 - 3460129 | 27308.1 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DWX04_14740 | Not Available | Negative | 3460150 - 3462108 | 72651.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

