Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s26 family signal peptidase | DWX04_14635 | Not Available | Negative | 3436253 - 3437677 | 55209.5 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DWX04_14640 | Not Available | Negative | 3437681 - 3438436 | 27422.6 |
| duf2851 family protein | DWX04_14645 | Not Available | Positive | 3438520 - 3439785 | 48546.3 |
| metallophosphatase | DWX04_14650 | Not Available | Negative | 3439943 - 3440944 | 36945.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX04_14655 | Not Available | Negative | 3440973 - 3442454 | 55455.9 |
| susc/raga family tonb-linked outer membrane protein | DWX04_14660 | Not Available | Negative | 3442469 - 3445615 | 115889.0 |
| hypothetical protein | DWX04_14665 | Not Available | Negative | 3445654 - 3446343 | 26553.2 |
| lactaldehyde reductase | DWX04_14670 | Not Available | Negative | 3446377 - 3447531 | 40917.7 |
| helicase | DWX04_14675 | Not Available | Negative | 3447745 - 3449001 | 48895.9 |
| hypothetical protein | DWX04_14680 | Not Available | Positive | 3449092 - 3449325 | 9006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

