Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| insulinase family protein | DWX04_14585 | Not Available | Positive | 3417814 - 3419034 | 46475.2 |
| glycoside hydrolase family 95 protein | DWX04_14590 | Not Available | Positive | 3419133 - 3421589 | 92140.2 |
| hybrid sensor histidine kinase/response regulator | DWX04_14595 | Not Available | Positive | 3421794 - 3425681 | 148500.0 |
| duf4976 domain-containing protein | DWX04_14600 | Not Available | Negative | 3425738 - 3427318 | 61341.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_14605 | Not Available | Negative | 3427352 - 3429193 | 69070.9 |
| tonb-dependent receptor | DWX04_14610 | Not Available | Negative | 3429206 - 3432460 | 120330.0 |
| mannonate dehydratase | DWX04_14615 | Not Available | Negative | 3432664 - 3433839 | 44467.5 |
| sdr family nad(p)-dependent oxidoreductase | DWX04_14620 | Not Available | Negative | 3433879 - 3434691 | 28729.8 |
| hypothetical protein | DWX04_14625 | Not Available | Negative | 3434696 - 3435352 | 25556.2 |
| signal peptidase i | DWX04_14630 | Not Available | Negative | 3435352 - 3436215 | 32796.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

