Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 3407910 - 3407984 | Not Available |
| dna repair protein reco | DWX04_14540 | Not Available | Positive | 3408228 - 3408953 | 28642.8 |
| arac family transcriptional regulator | DWX04_14545 | Not Available | Negative | 3409149 - 3409413 | 10101.9 |
| 4fe-4s dicluster domain-containing protein | DWX04_14550 | Not Available | Positive | 3410005 - 3410784 | 28476.2 |
| trna 2-thiouridine(34) synthase mnma | DWX04_14555 | Not Available | Positive | 3410784 - 3411911 | 42806.4 |
| aminopeptidase | DWX04_14560 | Not Available | Positive | 3411915 - 3414437 | 97348.2 |
| glycoside hydrolase | DWX04_14565 | Not Available | Negative | 3414448 - 3415485 | 38616.8 |
| carbohydrate kinase | DWX04_14570 | Not Available | Negative | 3415525 - 3416445 | 34622.3 |
| sis domain-containing protein | DWX04_14575 | Not Available | Negative | 3416556 - 3417158 | 21797.5 |
| tigr00730 family rossman fold protein | DWX04_14580 | Not Available | Negative | 3417176 - 3417712 | 19969.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

