Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_14485 | Not Available | Negative | 3390261 - 3390440 | 7034.63 |
| glycoside hydrolase family 97 protein | DWX04_14490 | Not Available | Negative | 3390493 - 3392709 | 84387.1 |
| alpha-amylase | DWX04_14495 | Not Available | Negative | 3392751 - 3394601 | 70818.0 |
| hypothetical protein | DWX04_14500 | Not Available | Positive | 3394850 - 3396445 | 62535.7 |
| hypothetical protein | DWX04_14505 | Not Available | Negative | 3396936 - 3399506 | 92875.2 |
| arac family transcriptional regulator | DWX04_14510 | Not Available | Negative | 3399579 - 3400064 | 19011.1 |
| mfs transporter | DWX04_14515 | Not Available | Negative | 3400770 - 3402125 | 49040.2 |
| 4-alpha-glucanotransferase | DWX04_14520 | Not Available | Negative | 3402199 - 3404877 | 104526.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DWX04_14525 | Not Available | Negative | 3405205 - 3407169 | 72969.4 |
| 30s ribosomal protein s20 | DWX04_14530 | Not Available | Negative | 3407616 - 3407870 | 9698.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

