Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cvpa family protein | DWX04_14335 | Not Available | Positive | 3348956 - 3349459 | 18078.1 |
| fe-s cluster assembly protein sufb | DWX04_14340 | Not Available | Positive | 3349467 - 3350918 | 54039.0 |
| fe-s cluster assembly atpase sufc | DWX04_14345 | Not Available | Positive | 3350946 - 3351698 | 27654.6 |
| fe-s cluster assembly protein sufd | DWX04_14350 | Not Available | Positive | 3351728 - 3353071 | 50473.4 |
| cysteine desulfurase | DWX04_14355 | Not Available | Positive | 3353078 - 3354292 | 45098.1 |
| hypothetical protein | DWX04_14360 | Not Available | Negative | 3354368 - 3354574 | 7892.31 |
| hypothetical protein | DWX04_14365 | Not Available | Positive | 3354573 - 3354845 | 10239.6 |
| hypothetical protein | DWX04_14370 | Not Available | Positive | 3354858 - 3355112 | 9954.58 |
| glycoside hydrolase | DWX04_14375 | Not Available | Negative | 3355207 - 3357141 | 73006.0 |
| duf4981 domain-containing protein | DWX04_14380 | Not Available | Negative | 3357159 - 3360335 | 121403.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

