Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_14125 | Not Available | Positive | 3306880 - 3307353 | 18360.6 |
| mgmt family protein | DWX04_14130 | Not Available | Negative | 3307303 - 3307656 | 13260.9 |
| nitrous oxide-stimulated promoter family protein | DWX04_14135 | Not Available | Negative | 3307662 - 3307955 | 11961.9 |
| maoc family dehydratase | DWX04_14140 | Not Available | Positive | 3308053 - 3308517 | 17703.5 |
| sdr family oxidoreductase | DWX04_14150 | Not Available | Negative | 3309691 - 3310566 | 33009.3 |
| gtra family protein | DWX04_14155 | Not Available | Negative | 3310583 - 3310972 | 14958.9 |
| zn-dependent alcohol dehydrogenase | DWX04_14165 | Not Available | Positive | 3312132 - 3313178 | 38299.2 |
| rna methyltransferase | DWX04_14170 | Not Available | Positive | 3313214 - 3314020 | 29058.5 |
| hypothetical protein | DWX04_14175 | Not Available | Positive | 3314033 - 3314221 | 7343.24 |
| hypothetical protein | DWX04_14180 | Not Available | Negative | 3315233 - 3315541 | 12084.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

