Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DWX04_14010 | Not Available | Positive | 3279582 - 3280811 | 44106.0 |
| hypothetical protein | DWX04_14015 | Not Available | Negative | 3281109 - 3281516 | 16282.0 |
| dna-binding protein | DWX04_14020 | Not Available | Positive | 3282314 - 3282625 | 12229.8 |
| dna-binding protein | DWX04_14025 | Not Available | Positive | 3282679 - 3282984 | 11994.2 |
| hypothetical protein | DWX04_14030 | Not Available | Positive | 3283159 - 3283356 | 7355.21 |
| hypothetical protein | DWX04_14035 | Not Available | Negative | 3283328 - 3283702 | 14209.4 |
| site-specific integrase | DWX04_14040 | Not Available | Negative | 3283705 - 3285048 | 51622.7 |
| site-specific integrase | DWX04_14045 | Not Available | Negative | 3285052 - 3286383 | 51297.7 |
| arylsulfatase | DWX04_14055 | Not Available | Negative | 3287123 - 3288640 | 57821.3 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DWX04_14065 | Not Available | Negative | 3288856 - 3292401 | 129303.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

