Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-sugar mutase | DWX04_13910 | Not Available | Positive | 3255764 - 3257509 | 64726.5 |
| eama family transporter | DWX04_13915 | Not Available | Positive | 3257692 - 3258612 | 34775.9 |
| aldose 1-epimerase family protein | DWX04_13920 | Not Available | Negative | 3258661 - 3259536 | 33987.7 |
| histidine kinase | DWX04_13925 | Not Available | Positive | 3259703 - 3261754 | 80002.5 |
| dna-binding response regulator | DWX04_13930 | Not Available | Positive | 3261882 - 3262646 | 29802.5 |
| wg repeat-containing protein | DWX04_13935 | Not Available | Positive | 3262912 - 3264606 | 63069.1 |
| hypothetical protein | DWX04_13940 | Not Available | Positive | 3264629 - 3265123 | 18008.1 |
| hypothetical protein | DWX04_13945 | Not Available | Positive | 3265274 - 3265759 | 18319.9 |
| hypothetical protein | DWX04_13950 | Not Available | Positive | 3265772 - 3266722 | 35178.2 |
| hypothetical protein | DWX04_13955 | Not Available | Positive | 3266730 - 3267665 | 34455.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

