Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase proenzyme | DWX04_01025 | Not Available | Positive | 220305 - 220991 | 25956.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DWX04_01030 | Not Available | Positive | 221003 - 221710 | 26073.4 |
| duf4834 family protein | DWX04_01035 | Not Available | Positive | 221763 - 222065 | 11555.5 |
| nucleoside deaminase | DWX04_01040 | Not Available | Negative | 222069 - 222503 | 15697.1 |
| hypothetical protein | DWX04_01045 | Not Available | Negative | 222505 - 222738 | 9401.63 |
| yran family protein | DWX04_01050 | Not Available | Positive | 222814 - 223179 | 14153.8 |
| mmcq/yjbr family dna-binding protein | DWX04_01055 | Not Available | Positive | 223197 - 223553 | 13937.7 |
| biotin--[acetyl-coa-carboxylase] ligase | DWX04_01060 | Not Available | Positive | 223537 - 224304 | 29272.0 |
| peptidase s41 | DWX04_01065 | Not Available | Negative | 224301 - 225740 | 54106.5 |
| mate family efflux transporter | DWX04_01070 | Not Available | Positive | 225899 - 227224 | 48953.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

