Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | DWX04_13810 | Not Available | Negative | 3235048 - 3235611 | 20648.0 |
| 50s ribosomal protein l25 | DWX04_13815 | Not Available | Negative | 3235636 - 3236232 | 21429.4 |
| duf3276 family protein | DWX04_13820 | Not Available | Negative | 3236412 - 3236795 | 14786.4 |
| transcription antitermination factor nusb | DWX04_13825 | Not Available | Positive | 3236991 - 3237917 | 36291.4 |
| preprotein translocase subunit yajc | DWX04_13830 | Not Available | Positive | 3237974 - 3238288 | 11609.3 |
| ybbr-like domain-containing protein | DWX04_13835 | Not Available | Positive | 3238302 - 3239315 | 39038.4 |
| dephospho-coa kinase | DWX04_13840 | Not Available | Positive | 3239308 - 3239904 | 22356.1 |
| hypothetical protein | DWX04_13845 | Not Available | Positive | 3239971 - 3240411 | 16022.1 |
| atp-dependent chaperone clpb | DWX04_13850 | Not Available | Negative | 3241523 - 3244111 | 97149.7 |
| hypothetical protein | DWX04_13855 | Not Available | Positive | 3244386 - 3244967 | 21484.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

