Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein para | DWX04_13655 | Not Available | Positive | 3200571 - 3201431 | 32261.0 |
| hypothetical protein | DWX04_13660 | Not Available | Positive | 3201459 - 3201857 | 15138.5 |
| marr family transcriptional regulator | DWX04_13665 | Not Available | Positive | 3201888 - 3202478 | 22247.2 |
| hypothetical protein | DWX04_13670 | Not Available | Positive | 3202460 - 3202894 | 16300.8 |
| duf4134 domain-containing protein | DWX04_13675 | Not Available | Positive | 3202961 - 3203317 | 12560.6 |
| duf4133 domain-containing protein | DWX04_13680 | Not Available | Positive | 3203330 - 3203620 | 10629.6 |
| trag family conjugative transposon atpase | DWX04_13685 | Not Available | Positive | 3203636 - 3206470 | 109830.0 |
| hypothetical protein | DWX04_13690 | Not Available | Positive | 3206464 - 3207210 | 27971.2 |
| hypothetical protein | DWX04_13695 | Not Available | Positive | 3207274 - 3207927 | 24436.4 |
| duf5045 domain-containing protein | DWX04_13700 | Not Available | Positive | 3207917 - 3208603 | 27082.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

