Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | DWX04_13440 | Not Available | Negative | 3151523 - 3151963 | 16248.5 |
| duf2461 domain-containing protein | DWX04_13445 | Not Available | Negative | 3152000 - 3152665 | 25851.7 |
| inositol monophosphatase | DWX04_13450 | Not Available | Negative | 3152741 - 3153529 | 29170.6 |
| phosphatidylinositol-4-phosphate 5-kinase | DWX04_13455 | Not Available | Negative | 3153537 - 3154655 | 42496.8 |
| insulinase family protein | DWX04_13460 | Not Available | Negative | 3154727 - 3156013 | 48625.5 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DWX04_13465 | Not Available | Negative | 3156014 - 3156772 | 28075.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | DWX04_13470 | Not Available | Positive | 3156851 - 3157225 | 14212.0 |
| transporter | DWX04_13485 | Not Available | Positive | 3157895 - 3158128 | 8866.64 |
| transaldolase | DWX04_13495 | Not Available | Positive | 3159191 - 3159847 | 23527.5 |
| arac family transcriptional regulator | DWX04_13500 | Not Available | Positive | 3159999 - 3160922 | 36234.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

