Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | DWX04_13390 | Not Available | Negative | 3141520 - 3142296 | 29142.2 |
| hypothetical protein | DWX04_13395 | Not Available | Positive | 3142354 - 3142803 | 17607.4 |
| hypothetical protein | DWX04_13400 | Not Available | Negative | 3142905 - 3143696 | 30517.8 |
| nif3-like dinuclear metal center hexameric protein | DWX04_13405 | Not Available | Negative | 3143705 - 3144799 | 40621.9 |
| hypothetical protein | DWX04_13410 | Not Available | Negative | 3144861 - 3145139 | 10839.2 |
| abc transporter permease | DWX04_13415 | Not Available | Negative | 3145198 - 3145995 | 29543.7 |
| atp-binding cassette domain-containing protein | DWX04_13420 | Not Available | Negative | 3146004 - 3146624 | 22739.8 |
| proline--trna ligase | DWX04_13425 | Not Available | Negative | 3146707 - 3148197 | 56833.0 |
| hypothetical protein | DWX04_13430 | Not Available | Negative | 3148312 - 3149463 | 44031.7 |
| 1,4-alpha-glucan-branching enzyme | DWX04_13435 | Not Available | Negative | 3149467 - 3151494 | 78102.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

