Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i fructose-bisphosphate aldolase | DWX04_00975 | Not Available | Positive | 209272 - 210324 | 38037.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DWX04_00980 | Not Available | Positive | 210486 - 211712 | 45914.5 |
| phospholipase | DWX04_00985 | Not Available | Positive | 211717 - 212136 | 15918.1 |
| metal abc transporter permease | DWX04_00990 | Not Available | Positive | 212189 - 213040 | 31196.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DWX04_00995 | Not Available | Positive | 213024 - 213452 | 16199.1 |
| hypothetical protein | DWX04_01000 | Not Available | Positive | 213514 - 213735 | 8312.45 |
| plasmid pria4b orf-3 family protein | DWX04_01005 | Not Available | Negative | 213850 - 215409 | 61127.4 |
| hypothetical protein | DWX04_01010 | Not Available | Negative | 215589 - 215924 | 12878.8 |
| thioredoxin | DWX04_01015 | Not Available | Negative | 215960 - 216274 | 11454.8 |
| dna polymerase iii subunit alpha | DWX04_01020 | Not Available | Negative | 216316 - 220113 | 143977.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

