Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_13275 | Not Available | Negative | 3115126 - 3115512 | 14818.4 |
| sodium-dependent transporter | DWX04_13280 | Not Available | Positive | 3115608 - 3116972 | 49193.4 |
| helix-hairpin-helix domain-containing protein | DWX04_13285 | Not Available | Positive | 3116980 - 3117882 | 35330.7 |
| alkaline phosphatase | DWX04_13290 | Not Available | Negative | 3117879 - 3119297 | 51615.1 |
| hypothetical protein | DWX04_13295 | Not Available | Positive | 3119390 - 3119584 | 7558.57 |
| hypothetical protein | DWX04_13300 | Not Available | Positive | 3119601 - 3120101 | 19273.6 |
| hypothetical protein | DWX04_13310 | Not Available | Negative | 3120842 - 3122059 | 45976.8 |
| dna gyrase subunit a | DWX04_13315 | Not Available | Negative | 3122090 - 3124657 | 96391.0 |
| atp-dependent clp protease atp-binding subunit | DWX04_13320 | Not Available | Positive | 3125022 - 3127538 | 93950.9 |
| molecular chaperone htpg | DWX04_13325 | Not Available | Positive | 3127673 - 3129718 | 78183.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

