Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2795 domain-containing protein | DWX04_13175 | Not Available | Positive | 3089124 - 3089345 | 8716.91 |
| porin family protein | DWX04_13180 | Not Available | Positive | 3089509 - 3090108 | 21578.2 |
| primosomal protein n' | DWX04_13185 | Not Available | Positive | 3090181 - 3092643 | 93845.1 |
| phosphatase | DWX04_13190 | Not Available | Positive | 3092691 - 3093401 | 26532.1 |
| low molecular weight phosphotyrosine protein phosphatase | DWX04_13195 | Not Available | Positive | 3093409 - 3093879 | 17874.5 |
| hdig domain-containing protein | DWX04_13200 | Not Available | Negative | 3093854 - 3095911 | 79191.8 |
| glutamate--trna ligase | DWX04_13205 | Not Available | Positive | 3095993 - 3097510 | 57833.2 |
| 3-deoxy-d-manno-octulosonic acid transferase | DWX04_13210 | Not Available | Positive | 3097523 - 3098743 | 46848.5 |
| hypothetical protein | DWX04_13215 | Not Available | Positive | 3099279 - 3099401 | 4325.11 |
| arac family transcriptional regulator | DWX04_13220 | Not Available | Positive | 3099944 - 3100432 | 18915.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

