Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DWX04_13125 | Not Available | Negative | 3080558 - 3081079 | 20156.9 |
| gnat family n-acetyltransferase | DWX04_13130 | Not Available | Negative | 3081097 - 3081528 | 16235.8 |
| n-acetyltransferase | DWX04_13135 | Not Available | Positive | 3081633 - 3082118 | 18685.6 |
| duf488 family protein | DWX04_13140 | Not Available | Positive | 3082192 - 3082548 | 14262.9 |
| acetyl-coa carboxylase biotin carboxylase subunit | DWX04_13145 | Not Available | Positive | 3082725 - 3084236 | 56985.6 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DWX04_13150 | Not Available | Positive | 3084261 - 3084776 | 19041.9 |
| acyl-coa carboxylase subunit beta | DWX04_13155 | Not Available | Positive | 3084779 - 3086311 | 55880.1 |
| aminopeptidase | DWX04_13160 | Not Available | Negative | 3086442 - 3087752 | 50755.5 |
| hypothetical protein | DWX04_13165 | Not Available | Positive | 3087857 - 3088480 | 24607.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DWX04_13170 | Not Available | Positive | 3088489 - 3089052 | 21334.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

