Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_13060 | Not Available | Negative | 3068778 - 3069200 | 16009.2 |
| hypothetical protein | DWX04_13065 | Not Available | Negative | 3069217 - 3069630 | 15911.0 |
| gnat family n-acetyltransferase | DWX04_13070 | Not Available | Negative | 3069661 - 3070092 | 16590.2 |
| crp/fnr family transcriptional regulator | DWX04_13075 | Not Available | Negative | 3070193 - 3070756 | 22292.5 |
| crp/fnr family transcriptional regulator | DWX04_13080 | Not Available | Negative | 3070766 - 3071338 | 22106.7 |
| duf1016 family protein | DWX04_13085 | Not Available | Negative | 3071572 - 3072726 | 44832.9 |
| site-specific integrase | DWX04_13090 | Not Available | Negative | 3072752 - 3073975 | 47206.9 |
| hypothetical protein | DWX04_13095 | Not Available | Negative | 3074346 - 3075008 | 25977.3 |
| hypothetical protein | DWX04_13100 | Not Available | Negative | 3075248 - 3076462 | 46779.9 |
| duf4080 domain-containing protein | DWX04_13120 | Not Available | Negative | 3078905 - 3080542 | 62703.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

