Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | DWX04_12960 | Not Available | Negative | 3053484 - 3054068 | 21446.7 |
| nad-dependent deacylase | DWX04_12965 | Not Available | Positive | 3054196 - 3054894 | 25689.8 |
| rubredoxin | DWX04_12970 | Not Available | Positive | 3054969 - 3055133 | 5868.75 |
| polyribonucleotide nucleotidyltransferase | DWX04_12975 | Not Available | Negative | 3055318 - 3057453 | 78631.8 |
| duf4369 domain-containing protein | DWX04_12980 | Not Available | Positive | 3057669 - 3058817 | 42886.3 |
| transcription elongation factor grea | DWX04_12985 | Not Available | Positive | 3059018 - 3059482 | 16780.4 |
| hit family protein | DWX04_12990 | Not Available | Positive | 3059534 - 3059941 | 15026.2 |
| mannose-1-phosphate guanylyltransferase | DWX04_12995 | Not Available | Negative | 3060030 - 3061073 | 39552.3 |
| Trna-leu | Not Available | Not Available | Positive | 3061258 - 3061344 | Not Available |
| hypothetical protein | DWX04_13005 | Not Available | Positive | 3061578 - 3062486 | 35251.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

