Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | DWX04_12900 | Not Available | Negative | 3039033 - 3040877 | 68180.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DWX04_12905 | Not Available | Negative | 3040961 - 3041470 | 17775.1 |
| glycine cleavage system protein h | DWX04_12910 | Not Available | Negative | 3041595 - 3041975 | 14151.4 |
| pap2 family protein | DWX04_12915 | Not Available | Negative | 3042012 - 3042668 | 24797.8 |
| rna polymerase sigma-54 factor | DWX04_12920 | Not Available | Negative | 3042679 - 3044148 | 56173.3 |
| glycyl-radical enzyme activating protein | DWX04_12930 | Not Available | Negative | 3044851 - 3045759 | 33550.0 |
| glycyl radical protein | DWX04_12935 | Not Available | Negative | 3045764 - 3048190 | 92037.7 |
| nucleoside kinase | DWX04_12940 | Not Available | Negative | 3048492 - 3050165 | 64724.8 |
| na/pi cotransporter family protein | DWX04_12945 | Not Available | Positive | 3050247 - 3051938 | 62887.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DWX04_12955 | Not Available | Negative | 3052596 - 3053462 | 31358.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

