Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol acyltransferase | DWX04_12845 | Not Available | Positive | 3029036 - 3029854 | 30976.8 |
| gnat family n-acetyltransferase | DWX04_12850 | Not Available | Positive | 3029878 - 3030858 | 37508.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | DWX04_12855 | Not Available | Negative | 3030947 - 3032278 | 50238.4 |
| dutp diphosphatase | DWX04_12860 | Not Available | Positive | 3032501 - 3032935 | 15780.1 |
| tetratricopeptide repeat protein | DWX04_12865 | Not Available | Positive | 3032945 - 3034753 | 69691.2 |
| duf4292 domain-containing protein | DWX04_12870 | Not Available | Positive | 3034750 - 3035583 | 31436.3 |
| peptidase m23 | DWX04_12875 | Not Available | Positive | 3035583 - 3036917 | 50710.1 |
| hypothetical protein | DWX04_12885 | Not Available | Negative | 3037089 - 3037298 | 8019.02 |
| rna-binding protein | DWX04_12890 | Not Available | Positive | 3037419 - 3037790 | 13160.2 |
| glutaminase | DWX04_12895 | Not Available | Negative | 3038105 - 3039019 | 34090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

