Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | DWX04_00925 | Not Available | Positive | 198417 - 199478 | 39864.2 |
| arac family transcriptional regulator | DWX04_00930 | Not Available | Positive | 199752 - 200612 | 34056.9 |
| hypothetical protein | DWX04_00935 | Not Available | Negative | 201050 - 201472 | 15707.8 |
| hypothetical protein | DWX04_00940 | Not Available | Negative | 202386 - 203381 | 38836.0 |
| dna-binding protein | DWX04_00945 | Not Available | Negative | 203434 - 204225 | 30865.8 |
| site-specific integrase | DWX04_00950 | Not Available | Negative | 204228 - 205472 | 48522.5 |
| Trna-pro | Not Available | Not Available | Positive | 205994 - 206071 | Not Available |
| dna polymerase iv | DWX04_00960 | Not Available | Positive | 206333 - 207427 | 41305.8 |
| adp-ribosylglycohydrolase | DWX04_00965 | Not Available | Negative | 207408 - 208196 | 29972.8 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DWX04_00970 | Not Available | Positive | 208360 - 209121 | 29086.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

