Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyldiphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferase | DWX04_12795 | Not Available | Negative | 3018004 - 3019134 | 40466.6 |
| ftsw/roda/spove family cell cycle protein | DWX04_12800 | Not Available | Negative | 3019199 - 3020596 | 51362.1 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DWX04_12805 | Not Available | Negative | 3020620 - 3021954 | 49945.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DWX04_12810 | Not Available | Negative | 3021974 - 3023242 | 47029.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DWX04_12815 | Not Available | Negative | 3023255 - 3024709 | 53286.2 |
| pasta domain-containing protein | DWX04_12820 | Not Available | Negative | 3024728 - 3026908 | 80368.7 |
| hypothetical protein | DWX04_12825 | Not Available | Negative | 3026913 - 3027287 | 14479.4 |
| ribosomal rna small subunit methyltransferase h | DWX04_12830 | Not Available | Negative | 3027292 - 3028206 | 34391.2 |
| transcriptional regulator mraz | DWX04_12835 | Not Available | Negative | 3028203 - 3028667 | 18115.8 |
| hypothetical protein | DWX04_12840 | Not Available | Negative | 3028702 - 3028929 | 8935.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

