Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | DWX04_12745 | Not Available | Positive | 3007978 - 3008577 | 22092.6 |
| duf2149 domain-containing protein | DWX04_12750 | Not Available | Positive | 3008579 - 3008908 | 12445.0 |
| duf4091 domain-containing protein | DWX04_12755 | Not Available | Negative | 3009222 - 3010970 | 66426.3 |
| ahpc/tsa family protein | DWX04_12760 | Not Available | Positive | 3011104 - 3012099 | 37138.8 |
| hypothetical protein | DWX04_12765 | Not Available | Positive | 3012152 - 3012356 | 7851.9 |
| gatb/yqey domain-containing protein | DWX04_12770 | Not Available | Negative | 3012585 - 3013034 | 15932.5 |
| cell division protein ftsz | DWX04_12775 | Not Available | Negative | 3013056 - 3014360 | 47936.9 |
| cell division protein ftsa | DWX04_12780 | Not Available | Negative | 3014398 - 3015900 | 54956.8 |
| cell division protein ftsq | DWX04_12785 | Not Available | Negative | 3015904 - 3016641 | 27832.3 |
| udp-n-acetylmuramate--l-alanine ligase | DWX04_12790 | Not Available | Negative | 3016638 - 3018014 | 51104.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

