Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m24 family protein | DWX04_12595 | Not Available | Negative | 2971183 - 2972574 | 51737.2 |
| patatin family protein | DWX04_12600 | Not Available | Positive | 2972904 - 2973758 | 32936.4 |
| hypothetical protein | DWX04_12605 | Not Available | Negative | 2973898 - 2974698 | 30070.0 |
| ribonuclease y | DWX04_12610 | Not Available | Negative | 2974890 - 2976425 | 57327.7 |
| cell division protein zapa | DWX04_12615 | Not Available | Negative | 2976526 - 2976819 | 11772.0 |
| hypothetical protein | DWX04_12620 | Not Available | Negative | 2976849 - 2977142 | 11779.2 |
| duf454 domain-containing protein | DWX04_12625 | Not Available | Negative | 2977315 - 2977677 | 14052.9 |
| 6-carboxytetrahydropterin synthase qued | DWX04_12630 | Not Available | Positive | 2977812 - 2978144 | 12835.3 |
| radical sam protein | DWX04_12635 | Not Available | Positive | 2978131 - 2978676 | 20479.5 |
| Trna-trp | Not Available | Not Available | Positive | 2978733 - 2978808 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

