Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_12385 | Not Available | Positive | 2913002 - 2914678 | 63045.8 |
| abc transporter atp-binding protein | DWX04_12390 | Not Available | Positive | 2915075 - 2917018 | 73660.4 |
| m13 family peptidase | DWX04_12395 | Not Available | Positive | 2917068 - 2919080 | 74919.9 |
| hypothetical protein | DWX04_12400 | Not Available | Positive | 2919110 - 2919613 | 19121.3 |
| efflux rnd transporter periplasmic adaptor subunit | DWX04_12405 | Not Available | Positive | 2919708 - 2920967 | 45794.5 |
| cusa/czca family heavy metal efflux rnd transporter | DWX04_12410 | Not Available | Positive | 2920979 - 2924062 | 112482.0 |
| tolc family protein | DWX04_12415 | Not Available | Positive | 2924073 - 2925242 | 43858.7 |
| nitroreductase family protein | DWX04_12420 | Not Available | Positive | 2925354 - 2926082 | 27942.3 |
| gfo/idh/moca family oxidoreductase | DWX04_12430 | Not Available | Negative | 2926450 - 2928012 | 58128.8 |
| homoserine o-succinyltransferase | DWX04_12435 | Not Available | Positive | 2928395 - 2929312 | 35760.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

