Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_12325 | Not Available | Negative | 2895964 - 2896152 | 7146.55 |
| port family protein | DWX04_12335 | Not Available | Positive | 2896637 - 2897314 | 25316.8 |
| beta-galactosidase | DWX04_12340 | Not Available | Positive | 2897612 - 2899651 | 78046.9 |
| hypothetical protein | DWX04_12345 | Not Available | Negative | 2900411 - 2900839 | 16662.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX04_12350 | Not Available | Positive | 2901073 - 2902599 | 57650.3 |
| sgnh/gdsl hydrolase family protein | DWX04_12355 | Not Available | Positive | 2903200 - 2904051 | 32515.9 |
| rna polymerase sigma-70 factor | DWX04_12365 | Not Available | Positive | 2906044 - 2906634 | 23285.1 |
| fecr family protein | DWX04_12370 | Not Available | Positive | 2906705 - 2907718 | 39115.7 |
| susc/raga family tonb-linked outer membrane protein | DWX04_12375 | Not Available | Positive | 2907968 - 2911282 | 122069.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_12380 | Not Available | Positive | 2911296 - 2912984 | 64144.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

