Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | DWX04_00875 | Not Available | Negative | 185430 - 185777 | 13742.9 |
| m23 family peptidase | DWX04_00880 | Not Available | Negative | 185811 - 186779 | 36405.9 |
| alanine--trna ligase | DWX04_00885 | Not Available | Positive | 186919 - 189537 | 97398.6 |
| duf2075 domain-containing protein | DWX04_00890 | Not Available | Negative | 189859 - 191277 | 53922.6 |
| hypothetical protein | DWX04_00895 | Not Available | Positive | 191375 - 192061 | 25516.8 |
| duf3822 family protein | DWX04_00900 | Not Available | Positive | 192064 - 192888 | 32372.8 |
| methyltransferase domain-containing protein | DWX04_00905 | Not Available | Positive | 192879 - 193439 | 21359.3 |
| cardiolipin synthase | DWX04_00910 | Not Available | Negative | 193408 - 194844 | 55394.1 |
| tonb-dependent receptor | DWX04_00915 | Not Available | Negative | 194937 - 197834 | 108141.0 |
| hypothetical protein | DWX04_00920 | Not Available | Negative | 197915 - 198319 | 15580.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

