Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnfabcdge type electron transport complex subunit d | DWX04_12120 | Not Available | Positive | 2853989 - 2854978 | 35358.5 |
| rnfabcdge type electron transport complex subunit g | DWX04_12125 | Not Available | Positive | 2854975 - 2855769 | 27080.0 |
| electron transport complex subunit e | DWX04_12130 | Not Available | Positive | 2855784 - 2856368 | 20626.5 |
| electron transport complex subunit rsxa | DWX04_12135 | Not Available | Positive | 2856387 - 2856989 | 21298.3 |
| hypothetical protein | DWX04_12140 | Not Available | Positive | 2857131 - 2858027 | 33994.2 |
| udp-glucose 4-epimerase gale | DWX04_12145 | Not Available | Positive | 2858060 - 2859094 | 37984.7 |
| lruc domain-containing protein | DWX04_12150 | Not Available | Positive | 2859388 - 2861265 | 71350.9 |
| yitt family protein | DWX04_12155 | Not Available | Positive | 2861406 - 2862296 | 32573.4 |
| aspartate ammonia-lyase | DWX04_12160 | Not Available | Positive | 2862560 - 2863993 | 52225.3 |
| hypothetical protein | DWX04_12165 | Not Available | Negative | 2863937 - 2864242 | 11612.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

