Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_11970 | Not Available | Positive | 2818117 - 2818374 | 9914.89 |
| duf4373 domain-containing protein | DWX04_11975 | Not Available | Positive | 2818608 - 2820101 | 56251.1 |
| toprim domain-containing protein | DWX04_11980 | Not Available | Positive | 2820575 - 2822098 | 58060.8 |
| hypothetical protein | DWX04_11985 | Not Available | Negative | 2822487 - 2822801 | 13007.3 |
| n-acetylmuramoyl-l-alanine amidase | DWX04_11990 | Not Available | Negative | 2822972 - 2823388 | 15858.4 |
| dna-binding protein | DWX04_11995 | Not Available | Negative | 2823648 - 2824136 | 17551.0 |
| duf4248 domain-containing protein | DWX04_12000 | Not Available | Positive | 2824488 - 2824706 | 8477.29 |
| quinoprotein amine dehydrogenase | DWX04_12005 | Not Available | Negative | 2824930 - 2826006 | 39489.4 |
| hypothetical protein | DWX04_12010 | Not Available | Negative | 2826038 - 2828113 | 78180.4 |
| replication-associated recombination protein a | DWX04_12015 | Not Available | Positive | 2828354 - 2829631 | 47220.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

