Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wxcm-like domain-containing protein | DWX04_11920 | Not Available | Positive | 2811495 - 2811902 | 15755.0 |
| wxcm-like domain-containing protein | DWX04_11925 | Not Available | Positive | 2811899 - 2812321 | 16004.6 |
| aminotransferase | DWX04_11930 | Not Available | Positive | 2812364 - 2813464 | 41649.1 |
| glycosyl transferase | DWX04_11935 | Not Available | Positive | 2813479 - 2814489 | 40164.5 |
| glycosyltransferase | DWX04_11940 | Not Available | Positive | 2814536 - 2815252 | 27624.6 |
| hypothetical protein | DWX04_11945 | Not Available | Positive | 2815257 - 2816069 | 30788.5 |
| hypothetical protein | DWX04_11950 | Not Available | Positive | 2816258 - 2816473 | 8582.31 |
| putative toxin-antitoxin system toxin component, pin family | DWX04_11955 | Not Available | Positive | 2816487 - 2816894 | 15752.8 |
| hypothetical protein | DWX04_11960 | Not Available | Negative | 2817389 - 2817640 | 9611.98 |
| hypothetical protein | DWX04_11965 | Not Available | Positive | 2817818 - 2818012 | 7299.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

