Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| psts family phosphate abc transporter substrate-binding protein | DWX04_11820 | Not Available | Negative | 2790844 - 2791662 | 29967.5 |
| phosphate abc transporter permease subunit pstc | DWX04_11825 | Not Available | Positive | 2791930 - 2793117 | 42792.7 |
| phosphate abc transporter permease ptsa | DWX04_11830 | Not Available | Positive | 2793214 - 2794101 | 32119.5 |
| phosphate abc transporter atp-binding protein | DWX04_11835 | Not Available | Positive | 2794199 - 2794951 | 28156.9 |
| phosphate transport system regulatory protein phou | DWX04_11840 | Not Available | Positive | 2795155 - 2795856 | 26659.2 |
| carboxypeptidase-like regulatory domain-containing protein | DWX04_11845 | Not Available | Positive | 2796258 - 2798831 | 99185.7 |
| nucleotidyltransferase | DWX04_11850 | Not Available | Positive | 2798940 - 2799233 | 11111.5 |
| duf86 domain-containing protein | DWX04_11855 | Not Available | Positive | 2799226 - 2799600 | 14457.7 |
| transcriptional regulator | DWX04_11860 | Not Available | Positive | 2799960 - 2801057 | 42334.1 |
| hypothetical protein | DWX04_11865 | Not Available | Positive | 2801166 - 2801387 | 8756.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

