Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DWX04_00825 | Not Available | Positive | 173301 - 175307 | 74632.1 |
| phosphatidate cytidylyltransferase | DWX04_00830 | Not Available | Positive | 175466 - 176305 | 30806.3 |
| hypothetical protein | DWX04_00835 | Not Available | Negative | 176297 - 177031 | 27460.8 |
| lipid-a-disaccharide synthase | DWX04_00840 | Not Available | Negative | 177088 - 178227 | 43067.6 |
| 5'/3'-nucleotidase sure | DWX04_00845 | Not Available | Negative | 178224 - 178997 | 28332.7 |
| para family protein | DWX04_00850 | Not Available | Positive | 179255 - 180022 | 28003.1 |
| parb/repb/spo0j family partition protein | DWX04_00855 | Not Available | Positive | 180026 - 180922 | 33345.2 |
| hypothetical protein | DWX04_00860 | Not Available | Positive | 180992 - 181699 | 26895.4 |
| lysm peptidoglycan-binding domain-containing protein | DWX04_00865 | Not Available | Positive | 181704 - 182966 | 47706.3 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DWX04_00870 | Not Available | Positive | 183068 - 185338 | 86308.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

