Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWX04_11665 | Not Available | Negative | 2742017 - 2744983 | 110500.0 |
| response regulator | DWX04_11670 | Not Available | Positive | 2745208 - 2749356 | 157458.0 |
| dna repair protein radc | DWX04_11675 | Not Available | Negative | 2749477 - 2750166 | 25557.9 |
| glycosyltransferase | DWX04_11680 | Not Available | Negative | 2750239 - 2751228 | 37604.6 |
| elongation factor p | DWX04_11685 | Not Available | Negative | 2751330 - 2751896 | 21126.5 |
| 50s ribosomal protein l34 | DWX04_11690 | Not Available | Positive | 2752099 - 2752254 | 6019.34 |
| anaerobic sulfatase-maturation protein | DWX04_11695 | Not Available | Negative | 2752433 - 2753668 | 48023.5 |
| atpase | DWX04_11700 | Not Available | Negative | 2753862 - 2755007 | 42928.5 |
| phosphatase pap2 family protein | DWX04_11705 | Not Available | Negative | 2755246 - 2756022 | 29161.7 |
| hypothetical protein | DWX04_11710 | Not Available | Negative | 2756351 - 2758747 | 90541.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

