Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DWX04_11615 | Not Available | Negative | 2729940 - 2730950 | 39101.1 |
| duf2156 domain-containing protein | DWX04_11620 | Not Available | Negative | 2730934 - 2731836 | 34328.3 |
| lrgb family protein | DWX04_11625 | Not Available | Negative | 2732060 - 2732755 | 24440.0 |
| cida/lrga family protein | DWX04_11630 | Not Available | Negative | 2732736 - 2733089 | 13036.8 |
| phosphate acetyltransferase | DWX04_11635 | Not Available | Positive | 2733292 - 2734305 | 35492.5 |
| acetate kinase | DWX04_11640 | Not Available | Positive | 2734331 - 2735527 | 42809.0 |
| udp-2,3-diacylglucosamine diphosphatase | DWX04_11645 | Not Available | Negative | 2735593 - 2736360 | 29795.7 |
| duf59 domain-containing protein | DWX04_11650 | Not Available | Negative | 2736492 - 2736812 | 11973.4 |
| hypothetical protein | DWX04_11655 | Not Available | Negative | 2737322 - 2740222 | 110181.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_11660 | Not Available | Negative | 2740335 - 2742005 | 63126.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

