Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_11465 | Not Available | Negative | 2674736 - 2675395 | 25627.5 |
| hypothetical protein | DWX04_11470 | Not Available | Negative | 2675444 - 2675896 | 17225.2 |
| atp-dependent exonuclease | DWX04_11475 | Not Available | Negative | 2675945 - 2679028 | 116225.0 |
| exonuclease subunit sbcd | DWX04_11480 | Not Available | Negative | 2679025 - 2680227 | 44942.9 |
| hypothetical protein | DWX04_11485 | Not Available | Positive | 2680399 - 2680674 | 10421.8 |
| addiction module toxin rele | DWX04_11490 | Not Available | Positive | 2680664 - 2681005 | 12875.8 |
| glycosyl hydrolase | DWX04_11495 | Not Available | Negative | 2681058 - 2683409 | 88896.1 |
| beta-galactosidase | DWX04_11500 | Not Available | Negative | 2683520 - 2685868 | 88310.6 |
| alpha-l-arabinofuranosidase | DWX04_11505 | Not Available | Negative | 2685885 - 2688383 | 92490.5 |
| glycoside hydrolase | DWX04_11510 | Not Available | Negative | 2688411 - 2690354 | 73261.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

