Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | DWX04_11415 | Not Available | Negative | 2665260 - 2665724 | 17401.2 |
| atp-dependent dna helicase recg | DWX04_11420 | Not Available | Negative | 2665945 - 2668041 | 79778.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DWX04_11425 | Not Available | Negative | 2668043 - 2668702 | 24343.5 |
| dj-1 family protein | DWX04_11430 | Not Available | Negative | 2668699 - 2669250 | 19256.6 |
| tonb family protein | DWX04_11435 | Not Available | Negative | 2669254 - 2670147 | 31458.6 |
| biopolymer transporter exbd | DWX04_11440 | Not Available | Negative | 2670157 - 2670576 | 16032.8 |
| mota/tolq/exbb proton channel family protein | DWX04_11445 | Not Available | Negative | 2670583 - 2671296 | 25729.8 |
| pyridoxine 5'-phosphate synthase | DWX04_11450 | Not Available | Negative | 2671296 - 2672012 | 26433.6 |
| nad kinase | DWX04_11455 | Not Available | Positive | 2672131 - 2673003 | 32172.3 |
| acyloxyacyl hydrolase | DWX04_11460 | Not Available | Positive | 2673175 - 2674485 | 49681.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

