Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | DWX04_11185 | Not Available | Positive | 2622066 - 2623622 | 57459.0 |
| phenylalanine--trna ligase subunit beta | DWX04_11190 | Not Available | Positive | 2623776 - 2626238 | 91165.9 |
| yebc/pmpr family dna-binding regulatory protein | DWX04_11195 | Not Available | Positive | 2626272 - 2627018 | 28034.9 |
| hypothetical protein | DWX04_11200 | Not Available | Negative | 2627295 - 2627963 | 25733.9 |
| hypothetical protein | DWX04_11205 | Not Available | Negative | 2627986 - 2628672 | 27285.8 |
| hypothetical protein | DWX04_11210 | Not Available | Negative | 2628694 - 2629047 | 13150.8 |
| hypothetical protein | DWX04_11215 | Not Available | Negative | 2629044 - 2629286 | 9313.1 |
| hypothetical protein | DWX04_11220 | Not Available | Negative | 2629390 - 2630172 | 30561.6 |
| hypothetical protein | DWX04_11225 | Not Available | Negative | 2630230 - 2630418 | 6548.29 |
| hypothetical protein | DWX04_11230 | Not Available | Negative | 2630453 - 2631544 | 39445.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

