Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin | DWX04_00765 | Not Available | Negative | 157712 - 163390 | 213486.0 |
| transcriptional regulator | DWX04_00775 | Not Available | Negative | 163878 - 164093 | 7844.62 |
| nucleoside deaminase | DWX04_00785 | Not Available | Positive | 165006 - 165473 | 16967.2 |
| aminoacyl-histidine dipeptidase | DWX04_00790 | Not Available | Negative | 165535 - 166995 | 53173.6 |
| upf0104 family protein | DWX04_00795 | Not Available | Negative | 166992 - 167996 | 37225.6 |
| ribosomal rna small subunit methyltransferase a | DWX04_00800 | Not Available | Positive | 168095 - 168937 | 31940.9 |
| magnesium transporter | DWX04_00805 | Not Available | Positive | 168969 - 170309 | 49694.8 |
| duf349 domain-containing protein | DWX04_00810 | Not Available | Positive | 170570 - 172378 | 70159.0 |
| Trna-gln | Not Available | Not Available | Positive | 172533 - 172603 | Not Available |
| ribosome silencing factor | DWX04_00820 | Not Available | Positive | 172924 - 173283 | 13409.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

