Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_11080 | Not Available | Negative | 2599483 - 2600469 | 39178.9 |
| fad-dependent oxidoreductase | DWX04_11085 | Not Available | Negative | 2600450 - 2601718 | 49406.7 |
| hypothetical protein | DWX04_11090 | Not Available | Negative | 2601854 - 2603146 | 50579.7 |
| hypothetical protein | DWX04_11095 | Not Available | Negative | 2603170 - 2604123 | 37707.2 |
| hypothetical protein | DWX04_11100 | Not Available | Negative | 2604120 - 2605610 | 55637.8 |
| hypothetical protein | DWX04_11105 | Not Available | Negative | 2606046 - 2606378 | 13201.2 |
| hypothetical protein | DWX04_11110 | Not Available | Negative | 2606469 - 2606789 | 12139.3 |
| hypothetical protein | DWX04_11115 | Not Available | Positive | 2607001 - 2607228 | 8518.21 |
| hypothetical protein | DWX04_11120 | Not Available | Negative | 2607464 - 2607847 | 14792.9 |
| upxy family transcription antiterminator | DWX04_11125 | Not Available | Negative | 2607930 - 2608478 | 21158.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

