Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_10980 | Not Available | Negative | 2574056 - 2574247 | 7178.66 |
| transcriptional regulator | DWX04_10985 | Not Available | Positive | 2574392 - 2574850 | 17399.9 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DWX04_10990 | Not Available | Positive | 2575303 - 2577159 | 68645.9 |
| hypothetical protein | DWX04_10995 | Not Available | Positive | 2577436 - 2577873 | 17467.4 |
| abc transporter permease | DWX04_11000 | Not Available | Negative | 2577934 - 2580258 | 86894.0 |
| abc transporter permease | DWX04_11005 | Not Available | Negative | 2580273 - 2582585 | 87495.2 |
| abc transporter atp-binding protein | DWX04_11010 | Not Available | Negative | 2582605 - 2583279 | 24853.2 |
| abc transporter permease | DWX04_11015 | Not Available | Negative | 2583314 - 2585623 | 86236.5 |
| m3 family peptidase | DWX04_11020 | Not Available | Positive | 2585945 - 2588050 | 79106.9 |
| acyltransferase | DWX04_11025 | Not Available | Positive | 2588231 - 2589391 | 44315.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

