Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DWX04_10930 | Not Available | Negative | 2564547 - 2564768 | 8545.67 |
| ribonucleotide-diphosphate reductase subunit alpha | DWX04_10935 | Not Available | Positive | 2565530 - 2566090 | 21620.0 |
| duf1273 family protein | DWX04_10940 | Not Available | Positive | 2566095 - 2566583 | 18708.8 |
| wyl domain-containing protein | DWX04_10945 | Not Available | Positive | 2566676 - 2567569 | 35070.1 |
| hypothetical protein | DWX04_10950 | Not Available | Negative | 2567590 - 2567838 | 9562.69 |
| tetr family transcriptional regulator | DWX04_10955 | Not Available | Negative | 2568112 - 2568792 | 25999.9 |
| recombinase recf | DWX04_10960 | Not Available | Negative | 2568797 - 2569885 | 40890.3 |
| toprim domain-containing protein | DWX04_10965 | Not Available | Negative | 2570054 - 2573332 | 124732.0 |
| dna-binding protein | DWX04_10970 | Not Available | Negative | 2573329 - 2573532 | 7602.17 |
| hypothetical protein | DWX04_10975 | Not Available | Negative | 2573723 - 2574037 | 12562.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

