Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DWX04_10820 | Not Available | Positive | 2544375 - 2545505 | 41918.1 |
| hypothetical protein | DWX04_10825 | Not Available | Positive | 2545502 - 2545924 | 15548.8 |
| hypothetical protein | DWX04_10830 | Not Available | Positive | 2545933 - 2547045 | 42096.2 |
| mobilization protein | DWX04_10835 | Not Available | Positive | 2547352 - 2548818 | 56903.9 |
| hypothetical protein | DWX04_10840 | Not Available | Negative | 2548979 - 2549824 | 32147.9 |
| duf4280 domain-containing protein | DWX04_10845 | Not Available | Negative | 2549835 - 2551055 | 43599.9 |
| hypothetical protein | DWX04_10850 | Not Available | Negative | 2551059 - 2551853 | 31328.3 |
| hypothetical protein | DWX04_10855 | Not Available | Negative | 2552137 - 2553891 | 67122.1 |
| energy transducer tonb | DWX04_10860 | Not Available | Negative | 2553909 - 2554775 | 32046.7 |
| hypothetical protein | DWX04_10865 | Not Available | Negative | 2554813 - 2555799 | 38286.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

