Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | DWX04_10660 | Not Available | Positive | 2510615 - 2511862 | 46563.0 |
| abc transporter permease | DWX04_10665 | Not Available | Positive | 2511990 - 2513291 | 49237.9 |
| abc transporter permease | DWX04_10670 | Not Available | Positive | 2513307 - 2514587 | 49265.9 |
| abc transporter atp-binding protein | DWX04_10675 | Not Available | Positive | 2514739 - 2515404 | 24564.0 |
| abc transporter permease | DWX04_10680 | Not Available | Positive | 2515455 - 2516732 | 47576.8 |
| abc transporter permease | DWX04_10685 | Not Available | Positive | 2516737 - 2518035 | 49339.2 |
| abc transporter permease | DWX04_10690 | Not Available | Positive | 2518294 - 2519586 | 47703.9 |
| abc transporter permease | DWX04_10695 | Not Available | Positive | 2519618 - 2520868 | 48031.8 |
| radical sam protein | DWX04_10705 | Not Available | Negative | 2523310 - 2524338 | 38884.5 |
| hypothetical protein | DWX04_10710 | Not Available | Negative | 2524338 - 2524736 | 15450.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

