Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 149256 - 149343 | Not Available |
| tatd family deoxyribonuclease | DWX04_00720 | Not Available | Negative | 149511 - 150284 | 29324.4 |
| polyprenyl synthetase family protein | DWX04_00725 | Not Available | Negative | 150286 - 151263 | 36822.8 |
| energy transducer tonb | DWX04_00730 | Not Available | Negative | 151345 - 152028 | 25691.0 |
| (d)cmp kinase | DWX04_00735 | Not Available | Positive | 152214 - 152903 | 25717.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DWX04_00740 | Not Available | Positive | 152896 - 153762 | 32600.1 |
| 6-phosphofructokinase | DWX04_00745 | Not Available | Positive | 153844 - 154824 | 35428.5 |
| methylmalonyl co-a mutase-associated gtpase meab | DWX04_00750 | Not Available | Negative | 154913 - 156010 | 40389.6 |
| duf1573 domain-containing protein | DWX04_00755 | Not Available | Negative | 156013 - 157089 | 39188.1 |
| hypothetical protein | DWX04_00760 | Not Available | Positive | 157220 - 157651 | 17029.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

